STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC105909465MAGUK p55 subfamily member 5-A-like. (690 aa)    
Predicted Functional Partners:
ENSCHAP00000008881
Angiomotin.
    
 0.958
pard6a
Par-6 family cell polarity regulator alpha.
    
0.920
ENSCHAP00000042438
Par-6 partitioning defective 6 homolog beta (C. elegans).
    
0.902
ENSCHAP00000019334
PATJ crumbs cell polarity complex component.
    
 0.865
ENSCHAP00000028345
annotation not available
    
 0.865
MPDZ
Multiple PDZ domain crumbs cell polarity complex component.
    
 0.865
ENSCHAP00000018444
annotation not available
    
 0.859
CRB2
Crumbs cell polarity complex component 2.
    
 0.831
ENSCHAP00000035003
Crumbs cell polarity complex component 2b.
    
 0.831
ENSCHAP00000035533
Crumbs cell polarity complex component 1.
    
 0.831
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.