STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000002576ATP-binding cassette, sub-family B (MDR/TAP), member 11a. (1293 aa)    
Predicted Functional Partners:
LOC105897182
acetyl-CoA carboxylase-like.
   
 0.747
ENSCHAP00000059139
acetyl-CoA carboxylase alpha.
   
 0.747
ENSCHAP00000062707
acetyl-CoA carboxylase beta.
   
 0.747
ENSCHAP00000040121
ATP-binding cassette, sub-family H, member 1.
  
0.736
ENSCHAP00000011314
Katanin p60 subunit A-like 2.
  
 0.725
ENSCHAP00000000224
Ubiquinol-cytochrome c reductase core protein 2a.
   
 0.704
ENSCHAP00000054866
TAP binding protein (tapasin), tandem duplicate 2.
   
  0.699
ENSCHAP00000005612
Huntingtin interacting protein 1.
    
 0.690
ENSCHAP00000042646
annotation not available
    
 0.690
ENSCHAP00000049714
annotation not available
    
 0.690
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.