Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000002664Ring finger protein 10. (796 aa)    
Predicted Functional Partners:
haus2
HAUS augmin like complex subunit 2.
    
   0.732
ENSCHAP00000007991
Coenzyme Q5, methyltransferase.
      
 0.712
bicdl1
BICD family like cargo adaptor 1.
      
 0.704
rps3
Ribosomal protein S3.
    
 
 0.686
ube2t
Ubiquitin conjugating enzyme E2 T.
    
 
 0.682
ENSCHAP00000017001
Low density lipoprotein receptor-related protein 11.
      
 0.673
cops5
COP9 signalosome subunit 5.
      
 0.668
LOC105912322
Erlin-1-like.
    
 
 0.632
erlin2
ER lipid raft associated 2.
    
 
 0.632
ENSCHAP00000014529
annotation not available
    
 
 0.624
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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