STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000002709Activating signal cointegrator 1 complex subunit 2. (759 aa)    
Predicted Functional Partners:
ENSCHAP00000032794
Activating signal cointegrator 1 complex subunit 3.
    
 0.998
trip4
Thyroid hormone receptor interactor 4.
    
 0.997
ascc1
Activating signal cointegrator 1 complex subunit 1.
    
 0.994
snrnp200
Small nuclear ribonucleoprotein U5 subunit 200.
    
 0.985
ENSCHAP00000025746
annotation not available
    
 0.935
AKAP7
A-kinase anchoring protein 7.
    
 0.935
lig4
DNA ligase 4.
   
 
  0.924
ENSCHAP00000010505
Excision repair cross-complementation group 4.
   
 
  0.923
ENSCHAP00000020754
annotation not available
   
 
  0.919
ENSCHAP00000002754
Nonhomologous end-joining factor 1.
   
 
  0.913
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.