STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000002725Forkhead box P2. (685 aa)    
Predicted Functional Partners:
LOC105900785
Ubiquitin-conjugating enzyme E2 variant 3-like.
   
 
 0.716
cbfb
Core-binding factor subunit beta.
    
 0.691
runx2
RUNX family transcription factor 2.
    
 0.625
ENSCHAP00000021090
RUNX family transcription factor 2b.
    
 0.625
LOC105896069
Runt-related transcription factor 3-like.
    
 0.625
nfatc2
Nuclear factor of activated T cells 2.
    
 0.623
LOC105912643
POU domain, class 5, transcription factor 1-like.
    
 0.579
ENSCHAP00000045841
PR domain containing 14.
    
 0.578
ENSCHAP00000038235
RAR-related orphan receptor B.
    
 0.549
ENSCHAP00000037259
annotation not available
    
 0.546
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.