STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC105902205Thyrotropin-releasing hormone receptor-like. (408 aa)    
Predicted Functional Partners:
LOC105910072
Pro-thyrotropin-releasing hormone-A-like.
     
 0.905
LOC105889474
Guanine nucleotide-binding protein subunit alpha-11.
    
 0.887
ENSCHAP00000052663
annotation not available
    
 0.887
ENSCHAP00000053577
Guanine nucleotide binding protein (G protein), alpha 14a.
    
 0.887
ENSCHAP00000016183
Guanine nucleotide binding protein (G protein), alpha 15 (Gq class), tandem duplicate 3.
    
  0.884
LOC105912811
Guanine nucleotide-binding protein subunit alpha-14-like.
    
  0.884
LOC105904661
Thyrotropin-releasing hormone receptor-like.
  
  
0.861
LOC105890372
Thyrotropin-releasing hormone receptor-like.
  
  
0.839
ENSCHAP00000042537
Thyrotropin-releasing hormone receptor a.
  
  
0.838
ENSCHAP00000039757
Ghrelin/obestatin prepropeptide.
   
 0.800
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.