Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000002759MyoD family inhibitor domain containing. (253 aa)    
Predicted Functional Partners:
ENSCHAP00000050794
FERM domain containing 4Bb.
    
 
 0.675
ENSCHAP00000055990
FERM domain containing 4Ba.
    
 
 0.675
dtwd2
DTW domain containing 2.
      
 0.654
ENSCHAP00000029953
Sprouty homolog 1, antagonist of FGF signaling (Drosophila).
    
   0.591
ENSCHAP00000056646
Forkhead box P1b.
      
 0.572
ZFYVE21
Zinc finger FYVE-type containing 21.
    
   0.561
ENSCHAP00000038295
Zinc finger, FYVE domain containing 26.
    
   0.561
ENSCHAP00000038170
FERM domain containing 4A.
    
 
 0.560
ENSCHAP00000038205
annotation not available
    
 
 0.560
ENSCHAP00000002350
Transmembrane protein 168a.
      
 0.556
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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