STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000002787Leucine rich repeat containing 14B. (526 aa)    
Predicted Functional Partners:
asb16
Ankyrin repeat and SOCS box containing 16.
   
  
 0.534
lrrc20
Leucine rich repeat containing 20.
      
 0.522
ENSCHAP00000050695
Ankyrin repeat and SOCS box-containing 12a.
   
  
 0.519
LOC105894218
Leucine-rich repeat-containing protein 38-like.
      
 0.518
ENSCHAP00000056215
annotation not available
   
  
 0.485
LOC105906303
Ankyrin repeat and SOCS box protein 12-like.
   
  
 0.449
tmem38a
Transmembrane protein 38A.
   
  
 0.449
osbpl6
Oxysterol binding protein like 6.
      
 0.446
osbpl7
Oxysterol binding protein like 7.
      
 0.431
ENSCHAP00000000998
Oxysterol binding protein-like 11.
      
 0.430
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.