Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
gnb1G protein subunit beta 1. (464 aa)    
Predicted Functional Partners:
GNG4
G protein subunit gamma 4.
    
 0.866
pdc
Phosducin.
    
 0.849
ENSCHAP00000057368
Phosducin-like.
    
 0.849
ENSCHAP00000037565
annotation not available
    
 0.848
gnas
GNAS complex locus.
    
 0.848
gng13
G protein subunit gamma 13.
    
 0.847
LOC105889474
Guanine nucleotide-binding protein subunit alpha-11.
   
 0.827
ENSCHAP00000052663
annotation not available
   
 0.827
ENSCHAP00000053577
Guanine nucleotide binding protein (G protein), alpha 14a.
   
 0.827
ENSCHAP00000003051
annotation not available
    
   0.822
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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