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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000002863annotation not available (316 aa)    
Predicted Functional Partners:
pnpo
Pyridoxamine 5'-phosphate oxidase.
    
 0.934
iah1
Isoamyl acetate hydrolyzing esterase 1 (putative).
   
 0.890
pdxp
Pyridoxal phosphatase.
    
 0.875
ENSCHAP00000041184
Aldehyde oxidase 6.
     
 0.834
ENSCHAP00000005640
Pyridoxal phosphate binding protein.
  
  
 0.833
ENSCHAP00000026033
Phosphatase, orphan 2.
     
 0.825
pgp
Phosphoglycolate phosphatase.
    
 0.783
SKP1
S-phase kinase-associated protein 1-like.
    
 
 0.732
ENSCHAP00000052411
S-phase kinase-associated protein 1.
    
 
 0.732
rbks
Ribokinase.
    
 0.722
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.