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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC105895195Inosine-uridine preferring nucleoside hydrolase-like. (328 aa)    
Predicted Functional Partners:
aprt
Adenine phosphoribosyltransferase.
    
 0.933
ephx2
Epoxide hydrolase 2.
  
 
 0.920
ENSCHAP00000048812
Guanine deaminase.
  
 
 0.903
TYMP
Thymidine phosphorylase.
  
 
 0.899
ENSCHAP00000038384
annotation not available
  
 
 0.872
ENSCHAP00000055064
Adenosine deaminase 2a.
  
 
 0.865
ENSCHAP00000016121
Nicotinate phosphoribosyltransferase.
     
 0.855
ada
Adenosine deaminase.
  
 
 0.848
ENSCHAP00000002935
Zgc:136858.
  
 
  0.845
ENSCHAP00000036668
annotation not available
  
 
 0.838
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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