STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000002911annotation not available (448 aa)    
Predicted Functional Partners:
asmtl
Acetylserotonin O-methyltransferase like.
     
 0.881
ephx2
Epoxide hydrolase 2.
   
 0.867
suox
Sulfite oxidase.
     
 0.861
ENSCHAP00000024533
annotation not available
  
 0.824
ENSCHAP00000033279
Cytochrome b5 reductase 4.
   
 0.780
ENSCHAP00000062146
BRCA1 associated RING domain 1.
    
 0.758
ENSCHAP00000024514
WRN RecQ like helicase.
    
 0.744
ENSCHAP00000012618
annotation not available
  
 0.722
LOC105900004
Acyl carrier protein, mitochondrial-like.
  
 0.722
CYP26C1
Cytochrome P450 26C1-like.
  
  
  0.715
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.