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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000002916annotation not available (317 aa)    
Predicted Functional Partners:
ENSCHAP00000019685
annotation not available
   
  
 0.780
ENSCHAP00000020403
Discs, large (Drosophila) homolog-associated protein 5.
   
  
 0.659
nuf2
NUF2 component of NDC80 kinetochore complex.
   
  
 0.628
ncapd2
non-SMC condensin I complex subunit D2.
   
  
 0.589
ENSCHAP00000009576
Cell division cycle associated 8.
   
  
 0.586
LOC105908958
Baculoviral IAP repeat-containing protein 5.2-A-like.
   
  
 0.584
ENSCHAP00000039580
Baculoviral IAP repeat containing 5a.
   
  
 0.584
ube2c
Ubiquitin conjugating enzyme E2 C.
   
  
 0.581
ENSCHAP00000034036
Danio rerio tudor domain containing 7 b (tdrd7b), mRNA.
    
   0.569
ENSCHAP00000043863
Tudor domain containing 7 a.
    
   0.569
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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