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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000002965annotation not available (243 aa)    
Predicted Functional Partners:
mafk
MAF bZIP transcription factor K.
    
 0.901
LOC105901583
Transcription factor MafG-like.
    
 0.867
ENSCHAP00000041867
F-box and leucine-rich repeat protein 17.
    
  0.827
MAFG
MAF bZIP transcription factor G.
    
 0.789
ENSCHAP00000004813
Exportin 1 (CRM1 homolog, yeast) b.
    
  0.718
ENSCHAP00000016491
Exportin 1 (CRM1 homolog, yeast) a.
    
  0.718
ENSCHAP00000011314
Katanin p60 subunit A-like 2.
   
 
 0.678
ENSCHAP00000026474
annotation not available
    
 0.673
LOC105911913
Glycogen synthase kinase-3 beta.
    
 0.673
GSK3B
Glycogen synthase kinase 3 beta.
    
 0.673
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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