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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC105894955Nucleoside diphosphate kinase, mitochondrial-like. (222 aa)    
Predicted Functional Partners:
mrps16
Mitochondrial ribosomal protein S16.
  
 0.975
mrps12
Mitochondrial ribosomal protein S12.
  
 0.974
mrps10
Mitochondrial ribosomal protein S10.
  
  0.970
ENSCHAP00000035402
Mitochondrial ribosomal protein S6.
   
  0.967
ENSCHAP00000026704
Mitochondrial ribosomal protein S22.
   
 0.965
mrps15
Mitochondrial ribosomal protein S15.
  
 0.965
mrps11
Mitochondrial ribosomal protein S11.
  
 0.963
mrps9
Mitochondrial ribosomal protein S9.
  
  0.963
mrps14
Mitochondrial ribosomal protein S14.
  
 0.960
ENSCHAP00000002247
Mitochondrial ribosomal protein S5.
  
  0.956
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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