STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCNE2G1/S-specific cyclin-E2-like. (370 aa)    
Predicted Functional Partners:
ENSCHAP00000040485
Cyclin-dependent kinase 2.
   
 0.981
rb1
RB transcriptional corepressor 1.
   
 0.973
ENSCHAP00000052975
Retinoblastoma-like 1 (p107).
   
 0.973
LOC105913428
Cyclin-dependent kinase inhibitor 1B-like.
   
 0.969
LOC105910373
Cyclin-dependent kinase inhibitor 1B-like.
   
 0.969
cdkn1a
Cyclin dependent kinase inhibitor 1A.
   
 0.969
LOC105910485
Cyclin-dependent kinase inhibitor 1-like.
   
 0.969
ENSCHAP00000061683
Cyclin-dependent kinase inhibitor 1Ca.
   
 0.969
skp2
S-phase kinase associated protein 2.
   
 0.944
SKP1
S-phase kinase-associated protein 1-like.
    
 0.938
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.