STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ttll12Tubulin tyrosine ligase like 12. (632 aa)    
Predicted Functional Partners:
pbdc1
Polysaccharide biosynthesis domain containing 1.
    
   0.835
ENSCHAP00000009778
EEF1A lysine methyltransferase 1.
    
   0.740
ENSCHAP00000013356
Aldehyde dehydrogenase 6 family, member A1.
 
   
  0.596
ENSCHAP00000013896
Aldehyde dehydrogenase 6 family, member A1.
 
   
  0.596
ttll9
Tubulin tyrosine ligase like 9.
    
 
 0.577
LOC105889298
Elongation factor 1-alpha-like.
    
   0.570
LOC105912050
Elongation factor 1-alpha, somatic form.
    
   0.570
gspt1
G1 to S phase transition 1.
    
   0.570
LOC105892154
Elongation factor 1-alpha.
    
   0.570
LOC105899964
Eukaryotic peptide chain release factor GTP-binding subunit ERF3A-like.
    
   0.570
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.