STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACVR1BActivin A receptor type 1B. (498 aa)    
Predicted Functional Partners:
LOC105901923
Inhibin beta B chain-like.
   
 0.948
mstn
Myostatin.
    
 0.947
ENSCHAP00000012720
Southpaw.
    
 0.939
INHBB
Inhibin subunit beta B.
   
 0.932
ENSCHAP00000059947
Inhibin subunit beta Ab.
   
 0.932
ENSCHAP00000011539
Activin A receptor type 2Ba.
   
0.926
gdf11
Growth differentiation factor 11.
    
 0.926
gdf9
Growth differentiation factor 9.
    
 0.916
ENSCHAP00000010165
SMAD family member 2.
   
 0.914
SMAD3
Mothers against decapentaplegic homolog 3-like.
   
 0.914
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.