STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ypel2Yippee like 2. (470 aa)    
Predicted Functional Partners:
LOC105909062
Ectonucleotide pyrophosphatase/phosphodiesterase family member 2-like.
  
 
 0.876
ENSCHAP00000042329
annotation not available
     
 0.867
pla2g4a
Phospholipase A2 group IVA.
   
 
 0.863
lpcat4
Lysophosphatidylcholine acyltransferase 4.
  
 
 0.859
ENSCHAP00000022245
annotation not available
    
  0.857
ENSCHAP00000036682
Protein interacting with cyclin A1.
    
  0.857
ENSCHAP00000027818
Zgc:92162.
     
 0.855
pla2g12a
Phospholipase A2 group XIIA.
    
  0.855
ENSCHAP00000001523
Glycerophosphodiester phosphodiesterase domain containing 3b.
  
  
 
0.854
ENSCHAP00000024649
Glycerophosphodiester phosphodiesterase domain containing 3a.
  
  
 
0.854
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.