STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000003298annotation not available (1051 aa)    
Predicted Functional Partners:
ripk2
Receptor interacting serine/threonine kinase 2.
   
 0.897
ENSCHAP00000058704
Adhesion G protein-coupled receptor G1.
   
 0.884
ENSCHAP00000014293
annotation not available
    
 0.773
sugt1
SGT1 homolog, MIS12 kinetochore complex assembly cochaperone.
    
 0.772
ENSCHAP00000000994
annotation not available
    
0.747
ENSCHAP00000027369
annotation not available
     
 0.740
ENSCHAP00000019548
annotation not available
    
 0.736
ENSCHAP00000051761
annotation not available
    
 0.736
atg5
Autophagy related 5.
     
 0.730
atg12
Autophagy related 12.
     
 0.710
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.