STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gpr45G protein-coupled receptor 45. (382 aa)    
Predicted Functional Partners:
ENSCHAP00000012904
G protein-coupled receptor 176.
     
 0.572
ENSCHAP00000055455
annotation not available
    
  0.485
ENSCHAP00000005677
Prepronociceptin a.
    
  0.480
ENSCHAP00000007027
annotation not available
    
  0.478
ENSCHAP00000024130
G protein-coupled receptor 25.
     
0.463
ENSCHAP00000048484
HAUS augmin-like complex, subunit 3.
    
 0.458
ENSCHAP00000060831
annotation not available
    
 0.458
ENSCHAP00000037565
annotation not available
    
  0.447
gnas
GNAS complex locus.
    
  0.447
gng3
G protein subunit gamma 3.
   
  0.445
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.