Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
hif1anHypoxia inducible factor 1 subunit alpha inhibitor. (354 aa)    
Predicted Functional Partners:
LOC105909740
Hypoxia-inducible factor 1-alpha-like.
    
 0.967
LOC105892544
NF-kappa-B inhibitor alpha-like.
    
   0.955
ENSCHAP00000002026
Inversin.
    
 
 0.951
hif1a
Hypoxia inducible factor 1 subunit alpha.
    
 0.919
epas1
Endothelial PAS domain protein 1.
    
 0.919
ENSCHAP00000050928
annotation not available
    
 0.919
ENSCHAP00000051583
annotation not available
    
 0.919
ENSCHAP00000032408
Ankyrin repeat and SOCS box containing 4.
    
 
 0.887
gmds
GDP-mannose 4,6-dehydratase.
    
   0.871
ENSCHAP00000009322
Ubiquitin protein ligase E3A.
    
   0.848
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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