Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000003378annotation not available (599 aa)    
Predicted Functional Partners:
ENSCHAP00000002423
Membrane associated guanylate kinase, WW and PDZ domain containing 2b.
    
   0.744
ENSCHAP00000029490
Membrane associated guanylate kinase, WW and PDZ domain containing 2a.
    
   0.744
ENSCHAP00000035753
AP2 associated kinase 1a.
      
 0.693
tprg1l
Tumor protein p63 regulated 1 like.
      
 0.681
LOC105893231
Rho-related GTP-binding protein RhoG-like.
    
 0.669
LOC105905854
Rho-related GTP-binding protein RhoG-like.
    
 0.669
ENSCHAP00000018026
annotation not available
    
 0.623
LOC105906845
Cell division control protein 42 homolog.
    
 0.623
ENSCHAP00000060105
G protein-coupled receptor 153.
   
  
 0.600
ENSCHAP00000060892
Calcium/calmodulin-dependent serine protein kinase a.
    
 
 0.600
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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