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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000003378annotation not available (599 aa)    
Predicted Functional Partners:
LOC105893231
Rho-related GTP-binding protein RhoG-like.
    
 0.776
LOC105905854
Rho-related GTP-binding protein RhoG-like.
    
 0.776
ENSCHAP00000018026
annotation not available
    
 0.645
LOC105906845
Cell division control protein 42 homolog.
    
 0.645
ENSCHAP00000016563
annotation not available
    
 0.624
ENSCHAP00000058822
Eph receptor A2 b.
    
 0.570
ENSCHAP00000062624
Eph receptor A2 a.
    
 0.570
LOC105892187
Ras-related C3 botulinum toxin substrate 2.
    
  0.561
LOC105899959
Ras-related C3 botulinum toxin substrate 3.
    
  0.561
rac3
Rac family small GTPase 3.
    
  0.561
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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