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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000003418Zgc:101785. (298 aa)    
Predicted Functional Partners:
ENSCHAP00000040258
Annexin A2a.
  
0.871
ENSCHAP00000023023
annotation not available
    
 0.847
ENSCHAP00000007263
annotation not available
    
 0.841
ENSCHAP00000030807
S100 calcium binding protein A10b.
   
 0.762
LOC105891828
Protein S100-A1-like.
   
 0.762
ENSCHAP00000051909
annotation not available
    
 0.740
ENSCHAP00000051924
annotation not available
    
 0.740
ENSCHAP00000038996
Annexin A1a.
  
0.634
s100z
S100 calcium binding protein Z.
   
 0.557
svep1
Sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1.
    
  0.557
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.