STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000003457Interleukin 17 receptor D. (826 aa)    
Predicted Functional Partners:
ENSCHAP00000006414
Interleukin 17a/f1.
    
 0.844
il17d
Interleukin 17D.
    
 0.844
ENSCHAP00000058308
annotation not available
    
 0.844
ENSCHAP00000042287
IQ motif containing GTPase activating protein 1.
    
  0.602
ENSCHAP00000054535
IQ motif containing GTPase activating protein 2.
    
  0.602
ENSCHAP00000034955
Vinculin b.
  
  
  0.593
ENSCHAP00000025947
Vinculin a.
  
  
  0.591
ksr1
Kinase suppressor of ras 1.
   
  0.586
ENSCHAP00000013496
Kinase suppressor of ras 2.
   
  0.586
raf1
Raf-1 proto-oncogene, serine/threonine kinase.
   
  0.586
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.