Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
cxcr1C-X-C motif chemokine receptor 1. (340 aa)    
Predicted Functional Partners:
ENSCHAP00000049482
Chemokine (C-X-C motif) ligand 8a.
   
 0.995
ENSCHAP00000049598
annotation not available
    
  0.917
ENSCHAP00000049649
annotation not available
    
  0.917
LOC105894530
C-X-C chemokine receptor type 1-like.
  
  
 
0.903
ENSCHAP00000003451
Chemokine (C-X-C motif) receptor 1.
  
  
 
0.902
ENSCHAP00000003834
Chemokine (C-X-C motif) ligand 19.
     
  0.902
LOC105905820
Stromal cell-derived factor 1-like.
    
 0.813
ENSCHAP00000018535
Arrestin, beta 1.
   
 0.805
grk1
G protein-coupled receptor kinase 1.
    
 0.774
LOC105904870
Arrestin red cell isoform 1-like.
   
 0.767
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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