STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000003507annotation not available (556 aa)    
Predicted Functional Partners:
DCAF1
DDB1 and CUL4 associated factor 1.
    
 
 0.902
ENSCHAP00000047969
Thymidine kinase 2.
   
 
 0.594
ccna1
Cyclin A1.
    
 
 0.468
ccna2
Cyclin A2.
    
 
 0.468
ENSCHAP00000021743
Deoxyguanosine kinase.
   
 
 0.432
ENSCHAP00000044410
Cullin 4B.
    
 
 0.409
LOC105907442
Deoxycytidine kinase-like.
   
 
 0.408
ENSCHAP00000033954
Deoxycytidine kinase.
   
 
 0.408
ENSCHAP00000012285
Damage-specific DNA binding protein 1.
    
 
 0.403
ENSCHAP00000051618
annotation not available
   
 
 0.403
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.