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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000003527Testis expressed 30. (229 aa)    
Predicted Functional Partners:
mcrs1
Microspherule protein 1.
   
 0.965
kansl2
KAT8 regulatory NSL complex subunit 2.
    
 0.965
LOC105905879
methyl-CpG-binding domain protein 3-like.
    
 0.882
ENSCHAP00000055178
Methyl CpG binding protein 2.
    
 0.882
ENSCHAP00000054064
annotation not available
    
  0.856
ENSCHAP00000011418
annotation not available
    
 0.833
ENSCHAP00000011522
annotation not available
    
 0.833
ENSCHAP00000018720
PHD finger protein 13.
    
 0.833
ENSCHAP00000033319
Lysine (K)-specific methyltransferase 2E.
    
 0.833
LOC105911018
PHD finger protein 13-like.
    
 0.833
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.