STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000003533Serine/threonine kinase 10. (1115 aa)    
Predicted Functional Partners:
ENSCHAP00000008383
Myosin IXB.
   
 
 0.592
ENSCHAP00000038621
Myosin IXAa.
   
 
 0.592
ENSCHAP00000011258
Reticulon 4 receptor-like 1a.
     
 0.536
ENSCHAP00000055703
WW domain containing transcription regulator 1.
    
 0.533
sh3bp5
SH3 domain binding protein 5.
   
  
 0.522
ttc9b
Tetratricopeptide repeat domain 9B.
      
 0.520
ENSCHAP00000024959
F-box protein 43.
   
 
 0.496
ENSCHAP00000001646
Thyroid hormone receptor associated protein 3b.
   
  
 0.445
mthfs
Methenyltetrahydrofolate synthetase.
      
 0.445
ENSCHAP00000039986
Rho-associated, coiled-coil containing protein kinase 2a.
   
 
0.443
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.