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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000003535SIK family kinase 3. (1223 aa)    
Predicted Functional Partners:
ENSCHAP00000043220
CREB regulated transcription coactivator 3.
    
 0.674
CRTC2
CREB regulated transcription coactivator 2.
    
 0.666
ENSCHAP00000031616
annotation not available
    
 0.666
LOC105904907
CREB-regulated transcription coactivator 2-like.
    
 0.666
pla2g4a
Phospholipase A2 group IVA.
    
 0.596
ENSCHAP00000025941
Membrane associated guanylate kinase, WW and PDZ domain containing 3b.
   
 0.574
ripk4
Receptor interacting serine/threonine kinase 4.
    
0.568
ENSCHAP00000039209
CREB regulated transcription coactivator 1b.
     
 0.531
ENSCHAP00000050518
Diencephalon/mesencephalon homeobox 1b.
      
 0.528
ENSCHAP00000060892
Calcium/calmodulin-dependent serine protein kinase a.
   
 
0.520
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.