STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC105891949Basal cell adhesion molecule-like. (308 aa)    
Predicted Functional Partners:
ENSCHAP00000024728
annotation not available
  
 
  0.492
LGR5
Leucine rich repeat containing G protein-coupled receptor 5.
    
  0.485
lgr4
Leucine rich repeat containing G protein-coupled receptor 4.
    
  0.485
ENSCHAP00000024727
Relaxin family peptide receptor 1.
    
  0.485
ENSCHAP00000028999
Relaxin family peptide receptor 2a.
    
  0.485
ENSCHAP00000030605
Relaxin family peptide receptor 2, like.
    
  0.485
ENSCHAP00000024845
annotation not available
  
 
  0.483
ENSCHAP00000001500
Info leucine-rich repeat, immunoglobulin-like and transmembrane domains 3a.
    
  0.476
ENSCHAP00000006173
Leucine-rich repeat, immunoglobulin-like and transmembrane domains 1a.
    
  0.476
ENSCHAP00000024780
annotation not available
  
  0.476
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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