golga1 protein (Clupea harengus) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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Gene Fusion

Cooccurrence

Coexpression

Experiments

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[Homology]

Score

golga1

Golgin A1. (868 aa)

Predicted Functional Partners:

arl1

0.816

ENSCHAP00000025144

0.800

ENSCHAP00000010311

0.763

ENSCHAP00000014626

0.763

ENSCHAP00000041113

0.763

ENSCHAP00000024855

0.742

cog7

0.708

ENSCHAP00000060695

0.694

arfrp1

0.691

ENSCHAP00000019279

0.687

Your Current Organism:

Clupea harengus

NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSCHAP00000010311	ENSCHAP00000014626	ENSCHAP00000010311	ENSCHAP00000014626	Vesicle transport through interaction with t-SNAREs 1A.	annotation not available	0.768
ENSCHAP00000010311	ENSCHAP00000019279	ENSCHAP00000010311	ENSCHAP00000019279	Vesicle transport through interaction with t-SNAREs 1A.	Syntaxin 16.	0.999
ENSCHAP00000010311	ENSCHAP00000024855	ENSCHAP00000010311	ENSCHAP00000024855	Vesicle transport through interaction with t-SNAREs 1A.	annotation not available	0.781
ENSCHAP00000010311	ENSCHAP00000025144	ENSCHAP00000010311	ENSCHAP00000025144	Vesicle transport through interaction with t-SNAREs 1A.	annotation not available	0.717
ENSCHAP00000010311	ENSCHAP00000041113	ENSCHAP00000010311	ENSCHAP00000041113	Vesicle transport through interaction with t-SNAREs 1A.	GRIP and coiled-coil domain containing 1.	0.699
ENSCHAP00000010311	ENSCHAP00000060695	ENSCHAP00000010311	ENSCHAP00000060695	Vesicle transport through interaction with t-SNAREs 1A.	Component of oligomeric golgi complex 3.	0.928
ENSCHAP00000010311	arfrp1	ENSCHAP00000010311	ENSCHAP00000054955	Vesicle transport through interaction with t-SNAREs 1A.	ADP ribosylation factor related protein 1.	0.702
ENSCHAP00000010311	arl1	ENSCHAP00000010311	ENSCHAP00000038458	Vesicle transport through interaction with t-SNAREs 1A.	ADP ribosylation factor like GTPase 1.	0.781
ENSCHAP00000010311	cog7	ENSCHAP00000010311	ENSCHAP00000024339	Vesicle transport through interaction with t-SNAREs 1A.	Component of oligomeric golgi complex 7.	0.859
ENSCHAP00000010311	golga1	ENSCHAP00000010311	ENSCHAP00000003609	Vesicle transport through interaction with t-SNAREs 1A.	Golgin A1.	0.763
ENSCHAP00000014626	ENSCHAP00000010311	ENSCHAP00000014626	ENSCHAP00000010311	annotation not available	Vesicle transport through interaction with t-SNAREs 1A.	0.768
ENSCHAP00000014626	ENSCHAP00000019279	ENSCHAP00000014626	ENSCHAP00000019279	annotation not available	Syntaxin 16.	0.835
ENSCHAP00000014626	ENSCHAP00000024855	ENSCHAP00000014626	ENSCHAP00000024855	annotation not available	annotation not available	0.807
ENSCHAP00000014626	ENSCHAP00000025144	ENSCHAP00000014626	ENSCHAP00000025144	annotation not available	annotation not available	0.774
ENSCHAP00000014626	ENSCHAP00000041113	ENSCHAP00000014626	ENSCHAP00000041113	annotation not available	GRIP and coiled-coil domain containing 1.	0.830
ENSCHAP00000014626	ENSCHAP00000060695	ENSCHAP00000014626	ENSCHAP00000060695	annotation not available	Component of oligomeric golgi complex 3.	0.730
ENSCHAP00000014626	arfrp1	ENSCHAP00000014626	ENSCHAP00000054955	annotation not available	ADP ribosylation factor related protein 1.	0.671
ENSCHAP00000014626	arl1	ENSCHAP00000014626	ENSCHAP00000038458	annotation not available	ADP ribosylation factor like GTPase 1.	0.816
ENSCHAP00000014626	cog7	ENSCHAP00000014626	ENSCHAP00000024339	annotation not available	Component of oligomeric golgi complex 7.	0.671
ENSCHAP00000014626	golga1	ENSCHAP00000014626	ENSCHAP00000003609	annotation not available	Golgin A1.	0.763