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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000003796beta-1,4-N-acetyl-galactosaminyl transferase 1a. (529 aa)    
Predicted Functional Partners:
ENSCHAP00000042559
Xylosylprotein beta 1,4-galactosyltransferase, polypeptide 7 (galactosyltransferase I).
    
 0.920
ENSCHAP00000029970
ST3 beta-galactoside alpha-2,3-sialyltransferase 5.
     
 0.888
LOC105892436
Beta-hexosaminidase subunit alpha-like.
     
 0.877
ENSCHAP00000022769
Hexosaminidase B (beta polypeptide).
     
 0.877
ENSCHAP00000034232
Solute carrier family 33 member 1.
     
 0.866
b3galt4
Beta-1,3-galactosyltransferase 4.
     
 0.856
ENSCHAP00000010028
UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6.
     
 0.855
ENSCHAP00000057404
ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 5.
     
 0.855
ENSCHAP00000011995
ST3 beta-galactoside alpha-2,3-sialyltransferase 7.
     
 0.854
LOC105890758
Alpha-2,8-sialyltransferase 8F-like.
     
 0.852
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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