STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000003810annotation not available (416 aa)    
Predicted Functional Partners:
LOC105902549
1-acyl-sn-glycerol-3-phosphate acyltransferase alpha-like.
    
  0.644
ENSCHAP00000038357
Monoglyceride lipase.
   
 0.643
lypla1
Lysophospholipase 1.
     
 0.616
lypla2
Lysophospholipase 2.
     
 0.616
ENSCHAP00000042014
Anaphase promoting complex subunit 1.
     
 0.533
ENSCHAP00000016710
Lysophospholipase like 1.
     
 0.520
ube2s
Ubiquitin conjugating enzyme E2 S.
   
 
  0.515
ube2c
Ubiquitin conjugating enzyme E2 C.
   
 
  0.515
ENSCHAP00000018475
1-acylglycerol-3-phosphate O-acyltransferase 3.
    
 0.506
agpat4
1-acylglycerol-3-phosphate O-acyltransferase 4.
    
 0.506
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.