STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC105912298Transcription factor MafB-like. (332 aa)    
Predicted Functional Partners:
LOC105889814
Proto-oncogene c-Fos-like.
    
 
 0.804
ENSCHAP00000058915
Nuclear factor, erythroid 2-like 2a.
    
 0.702
ENSCHAP00000023735
Nuclear factor, erythroid 2-like 1a.
    
 0.671
NFE2L1
Nuclear factor, erythroid 2 like 1.
    
 0.671
ENSCHAP00000032514
Jun proto-oncogene, AP-1 transcription factor subunit.
   
 0.665
LOC105902506
Transcription factor AP-1-like.
   
 0.665
ENSCHAP00000002965
annotation not available
    
 0.655
ENSCHAP00000002985
BTB and CNC homology 1, basic leucine zipper transcription factor 1 a.
    
 0.655
ENSCHAP00000044421
BTB and CNC homology 1, basic leucine zipper transcription factor 1 b.
    
 0.655
ENSCHAP00000048297
BTB and CNC homology 1, basic leucine zipper transcription factor 2b.
    
 0.655
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.