STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000003911Nudix (nucleoside diphosphate linked moiety X)-type motif 9. (326 aa)    
Predicted Functional Partners:
ENSCHAP00000022444
Nudix (nucleoside diphosphate linked moiety X)-type motif 5.
    
 0.930
ENSCHAP00000032854
annotation not available
     
 0.782
ENSCHAP00000037940
annotation not available
     
 0.782
ENSCHAP00000042001
Phosphoribosyl pyrophosphate synthetase 1A.
     
 0.782
ENSCHAP00000028065
Nudix (nucleoside diphosphate linked moiety X)-type motif 14.
    
 0.767
ENSCHAP00000031909
Transient receptor potential cation channel, subfamily M, member 6.
 
   
 0.740
nudt3
Nudix hydrolase 3.
    
 0.684
ENSCHAP00000058189
Transient receptor potential cation channel, subfamily M, member 7.
 
   
 0.674
LOC105901301
Serine/arginine-rich splicing factor 2-like.
 
   
  0.644
LOC105897507
Diphosphoinositol polyphosphate phosphohydrolase 3-beta-like.
    
 0.599
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.