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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC105896819VIP peptides-like. (165 aa)    
Predicted Functional Partners:
ENSCHAP00000012766
Vasoactive intestinal peptide receptor 1b.
    
 0.962
ENSCHAP00000007899
annotation not available
    
 0.955
ENSCHAP00000054503
Vasoactive intestinal peptide receptor 2.
    
 0.955
ENSCHAP00000007152
Growth hormone releasing hormone receptor a.
    
 0.942
ENSCHAP00000058727
Vasoactive intestinal peptide receptor 1a.
    
 0.942
tac1
Tachykinin precursor 1.
   
  
 0.934
LOC105911277
Calcitonin-1-like.
   
 
 0.934
ENSCHAP00000005798
Growth hormone releasing hormone receptor 2.
    
 0.928
ENSCHAP00000018054
Adenylate cyclase activating polypeptide 1a (pituitary) receptor type I.
    
 0.883
LOC105894061
Adrenocorticotropic hormone receptor-like.
   
 
 0.882
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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