Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
LOC105896819VIP peptides-like. (165 aa)    
Predicted Functional Partners:
ENSCHAP00000012766
Vasoactive intestinal peptide receptor 1b.
    
 0.987
ENSCHAP00000007899
annotation not available
    
 0.986
ENSCHAP00000054503
Vasoactive intestinal peptide receptor 2.
    
 0.986
ENSCHAP00000058727
Vasoactive intestinal peptide receptor 1a.
    
 0.983
ENSCHAP00000007152
Growth hormone releasing hormone receptor a.
    
 0.976
tac1
Tachykinin precursor 1.
   
  
 0.943
LOC105911277
Calcitonin-1-like.
   
 
 0.934
ENSCHAP00000018054
Adenylate cyclase activating polypeptide 1a (pituitary) receptor type I.
    
 0.868
sst
Somatostatin.
  
  
 0.771
ENSCHAP00000016473
annotation not available
    
 0.714
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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