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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000004043annotation not available (215 aa)    
Predicted Functional Partners:
ENSCHAP00000022444
Nudix (nucleoside diphosphate linked moiety X)-type motif 5.
    
 0.930
ENSCHAP00000028065
Nudix (nucleoside diphosphate linked moiety X)-type motif 14.
    
 0.782
ENSCHAP00000032854
annotation not available
     
 0.772
ENSCHAP00000037940
annotation not available
     
 0.772
ENSCHAP00000042001
Phosphoribosyl pyrophosphate synthetase 1A.
     
 0.772
ENSCHAP00000026432
Transformer 2 alpha homolog.
   
 
  0.596
ENSCHAP00000030269
Transformer 2 beta homolog.
   
 
  0.596
nudt3
Nudix hydrolase 3.
    
 0.583
LOC105897507
Diphosphoinositol polyphosphate phosphohydrolase 3-beta-like.
    
 0.583
LOC105898052
Diphosphoinositol polyphosphate phosphohydrolase 3-beta-like.
    
 0.583
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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