STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000004062Phospholipid phosphatase 2a. (292 aa)    
Predicted Functional Partners:
acer3
Alkaline ceramidase 3.
     
 0.923
sgpl1
Sphingosine-1-phosphate lyase 1.
    
 0.914
ENSCHAP00000000995
annotation not available
     
 0.907
ENSCHAP00000012655
Lipin 1.
    
 0.907
kdsr
3-ketodihydrosphingosine reductase.
    
 0.906
cers6
Ceramide synthase 6.
    
 0.896
ENSCHAP00000009604
Lipin 2.
    
 0.895
LPIN2
Lipin 2.
    
 0.895
ENSCHAP00000058147
Si:ch73-21k16.1.
    
 0.895
plpp3
Phospholipid phosphatase 3.
  
 
 
0.895
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.