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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000004070Myosin light chain kinase 2. (817 aa)    
Predicted Functional Partners:
LOC105894777
Myosin regulatory light chain 2, smooth muscle minor isoform.
   
 0.924
ENSCHAP00000044122
Calmodulin-like 4b.
   
 0.918
CALML6
Calmodulin like 6.
   
 0.917
LOC105897346
Myosin light polypeptide 6.
   
 0.913
ENSCHAP00000026128
Myosin, light chain 7, regulatory.
   
 0.913
calm1
Calmodulin.
   
 0.907
LOC105913012
Myosin light chain 4-like.
   
 0.893
myl3
Myosin light chain 3.
   
 0.893
myl4
Myosin light chain 4.
   
 0.893
ENSCHAP00000029416
Calmodulin-like 4a.
   
  0.892
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.