STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sh3pxd2bSH3 and PX domains 2B. (877 aa)    
Predicted Functional Partners:
ENSCHAP00000051076
Hyaluronan-mediated motility receptor (RHAMM).
     
 0.707
ENSCHAP00000035585
NADPH oxidase activator 1.
    
 0.675
ENSCHAP00000049809
Neutrophil cytosolic factor 2.
    
 0.675
INSC
INSC spindle orientation adaptor protein.
      
 0.671
ENSCHAP00000009243
annotation not available
    
 0.662
pak2
P21 (RAC1) activated kinase 2.
    
 0.662
ENSCHAP00000029091
P21 protein (Cdc42/Rac)-activated kinase 2a.
    
 0.662
ENSCHAP00000030067
P21 protein (Cdc42/Rac)-activated kinase 1.
    
 0.662
pak4
P21 (RAC1) activated kinase 4.
    
 0.662
LOC105909558
Serine/threonine-protein kinase PAK 6-like.
    
 0.662
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.