STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000004161annotation not available (388 aa)    
Predicted Functional Partners:
ENSCHAP00000060131
Cyclin G associated kinase.
    
 0.989
ENSCHAP00000018491
Cbl proto-oncogene B, E3 ubiquitin protein ligase.
    
 0.846
ENSCHAP00000037623
Synaptojanin 1.
    
 
 0.816
ENSCHAP00000025157
Cbl proto-oncogene, E3 ubiquitin protein ligase.
    
 0.798
ENSCHAP00000034698
annotation not available
    
 0.784
ENSCHAP00000057104
annotation not available
    
 0.784
ENSCHAP00000009070
Cbl proto-oncogene C, E3 ubiquitin protein ligase.
    
 0.753
ENSCHAP00000052151
Insulin-like growth factor 1a receptor.
    
  0.753
ENSCHAP00000012175
DnaJ (Hsp40) homolog, subfamily C, member 6.
    
 0.745
ENSCHAP00000015036
Dynamin 1a.
   
 0.745
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.