Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KCNA3Potassium voltage-gated channel subfamily A member 3-like. (514 aa)    
Predicted Functional Partners:
ENSCHAP00000008683
FAU ubiquitin like and ribosomal protein S30 fusion a.
   
  0.912
ENSCHAP00000030857
annotation not available
  
  0.740
rpl34
Ribosomal protein L34.
  
 0.738
rpl29
Ribosomal protein L29.
   
 0.735
rpl31
Ribosomal protein L31.
   
 0.735
ENSCHAP00000051592
Ribosomal protein L24.
  
  0.722
rpl15
Ribosomal protein L15.
   
  0.719
rpl35
Ribosomal protein L35.
  
 0.712
ENSCHAP00000005646
Ribosomal protein L23.
  
 0.711
ENSCHAP00000041531
Ribosomal protein L36A.
  
 0.709
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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