STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000004174ArfGAP with SH3 domain, ankyrin repeat and PH domain 1b. (1230 aa)    
Predicted Functional Partners:
ENSCHAP00000011036
ADP-ribosylation factor 6a.
    
 0.773
ENSCHAP00000004710
ArfGAP with SH3 domain, ankyrin repeat and PH domain 3.
  
 
 
0.759
ENSCHAP00000016273
annotation not available
    
 0.743
ENSCHAP00000002698
HESX homeobox 1.
   
 
0.720
ENSCHAP00000044126
Adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 2.
   
 
0.720
ENSCHAP00000059265
RAB3A interacting protein (rabin3).
     
 0.705
ENSCHAP00000032485
Exocyst complex component 5.
   
 
 0.702
arfgap1
ADP ribosylation factor GTPase activating protein 1.
    
0.676
ENSCHAP00000002398
ADP-ribosylation factor GTPase activating protein 3.
    
0.645
exoc4
Exocyst complex component 4.
     
 0.642
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.