STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC105895368Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform. (612 aa)    
Predicted Functional Partners:
ptpa
Protein phosphatase 2 phosphatase activator.
   
 0.992
ppp2ca
Protein phosphatase 2 catalytic subunit alpha.
   
 0.985
ENSCHAP00000029157
Protein phosphatase 2, regulatory subunit B, delta.
    
 0.981
ppp2cb
Protein phosphatase 2 catalytic subunit beta.
   
 0.979
LOC105902388
Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B beta isoform.
    
 0.979
ENSCHAP00000009030
annotation not available
    
 0.973
ENSCHAP00000006497
Protein phosphatase methylesterase 1.
    
 0.972
ENSCHAP00000036290
Protein phosphatase 4, catalytic subunit b.
   
 0.972
ENSCHAP00000007350
annotation not available
    
 0.968
ENSCHAP00000020088
Striatin interacting protein 1.
    
 0.968
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.