STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000004262annotation not available (324 aa)    
Predicted Functional Partners:
ENSCHAP00000060507
Si:ch211-141o9.10.
   
 0.958
ENSCHAP00000017284
Nth-like DNA glycosylase 1.
  
 0.913
pcna
Proliferating cell nuclear antigen.
  
 0.899
snrpd2
Small nuclear ribonucleoprotein D2 polypeptide.
   
 0.885
ENSCHAP00000000470
annotation not available
   
 0.883
snrpe
Small nuclear ribonucleoprotein polypeptide E.
   
 0.877
snrpf
Small nuclear ribonucleoprotein polypeptide F.
   
 0.870
ENSCHAP00000053521
8-oxoguanine DNA glycosylase.
  
 0.860
snrpg
Small nuclear ribonucleoprotein polypeptide G.
   
 0.859
snrpd3
Small nuclear ribonucleoprotein D3 polypeptide.
   
 0.853
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.