STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000004277annotation not available (145 aa)    
Predicted Functional Partners:
RBM22
RNA binding motif protein 22.
   
 0.622
rbm22
RNA binding motif protein 22.
   
 0.622
ENSCHAP00000037373
Heat shock protein 90, beta (grp94), member 1.
   
 0.608
rpl9
Ribosomal protein L9.
    
  0.598
ENSCHAP00000001156
Selenoprotein J.
    
 0.526
ENSCHAP00000019849
Nuclear receptor corepressor 2.
    
 0.526
ENSCHAP00000031150
Nuclear receptor corepressor 1.
    
 0.526
ENSCHAP00000056264
annotation not available
    
 0.526
ENSCHAP00000048371
Mediator complex subunit 14.
    
  0.522
ENSCHAP00000027704
annotation not available
    
  0.516
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.