STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC105912216Protein snail homolog Sna-like. (261 aa)    
Predicted Functional Partners:
snai2
Snail family transcriptional repressor 2.
  
 
 
0.649
ENSCHAP00000020989
Snail family zinc finger 2.
   
 
 
0.639
SNAI3
Snail family transcriptional repressor 3.
  
  
 
0.604
kpnb1
Karyopherin subunit beta 1.
    
   0.528
ENSCHAP00000028992
REST corepressor 1.
    
 0.432
ENSCHAP00000039387
REST corepressor 2.
    
 0.432
ENSCHAP00000040166
REST corepressor 3.
    
 0.432
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.