Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
creg1Cellular repressor of E1A stimulated genes 1. (197 aa)    
Predicted Functional Partners:
ENSCHAP00000009807
Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 4b.
      
 0.699
ENSCHAP00000036036
Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 4a.
      
 0.699
ENSCHAP00000061036
annotation not available
      
 0.697
ENSCHAP00000029637
annotation not available
      
 0.656
ndufs2
NADH:ubiquinone oxidoreductase core subunit S2.
      
 0.652
ENSCHAP00000005643
Rho guanine nucleotide exchange factor (GEF) 1b.
      
 0.632
ENSCHAP00000011881
Rho guanine nucleotide exchange factor (GEF) 12b.
      
 0.632
ENSCHAP00000019883
Cleavage stimulation factor, 3' pre-RNA, subunit 2.
 
    
 0.614
ENSCHAP00000017836
Interferon regulatory factor 3.
      
 0.602
ENSCHAP00000004510
Spermine synthase.
      
 0.598
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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