STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000004369Vascular endothelial growth factor D. (288 aa)    
Predicted Functional Partners:
ENSCHAP00000006669
Fms-related tyrosine kinase 4.
    
 0.955
ENSCHAP00000022623
Kinase insert domain receptor (a type III receptor tyrosine kinase).
    
 0.954
ENSCHAP00000035307
annotation not available
    
 0.952
ENSCHAP00000050753
Kinase insert domain receptor like.
    
 0.952
ENSCHAP00000024537
annotation not available
     
0.925
ENSCHAP00000017905
Platelet derived growth factor c.
     
 0.924
ENSCHAP00000010756
Platelet-derived growth factor receptor, alpha polypeptide.
    
 0.913
ENSCHAP00000041191
TEK tyrosine kinase, endothelial.
    
 0.908
vegfc
Vascular endothelial growth factor C.
     
0.904
ENSCHAP00000014857
Fibroblast growth factor receptor 2.
   
 0.888
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.